id,title,description,date_created,date_modified,date_published,original_publication_date,publication_doi,provider,is_published,reviews_state,version,is_latest_version,preprint_doi,license,tags_list,tags_data,contributors_list,contributors_data,first_author,subjects_list,subjects_data,download_url,has_coi,conflict_of_interest_statement,has_data_links,has_prereg_links,prereg_links,prereg_link_info,last_updated
azytc_v1,Discovering the rules of plant biogeography using a trait-based approach,"Lineage-specific traits determine how plants interact with their surrounding environment. As different species may find similar phenotypic solutions through evolution to tolerate, persist in and invade environments with certain characteristics, some traits may become more common in certain types of habitats. These general patterns of geographical trait distribution point towards the existence of some rules in how plants diversify in space over time. Trait-environment correlation analyses are ways to discover general rules in plant biogeography by quantifying to what extent unrelated lineages have similar evolutionary responses to a given type of habitat. In this synthesis, I give a short historical overview on trait-environment correlation analyses, from some key observations from classic naturalists to modern approaches using trait evolution models, large phylogenies, and massive datasets of traits and distributions. I discuss some limitations of modern approaches, including the need for more realistic models, the lack of data from tropical areas, and the necessary focus on trait scoring that goes beyond macro-morphology. Overcoming these limitations will allow the field to explore new questions related to trait lability and niche evolution and to better set apart rules and exceptions in how plants diversify in space over time.",2022-09-30T02:17:54.240993,2023-02-14T22:40:35.879667,2022-09-30T21:01:00.348079,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/azytc,CC-By Attribution-ShareAlike 4.0 International,,[],Thais Vasconcelos,"[{""id"": ""d96uh"", ""name"": ""Thais Vasconcelos"", ""index"": 0, ""orcid"": null, ""bibliographic"": true}]",Thais Vasconcelos,Life Sciences; Ecology and Evolutionary Biology; Biodiversity,"[{""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecac01"", ""text"": ""Biodiversity""}]",,0,,not_applicable,not_applicable,[],,2025-04-09T20:50:17.161341
d7rh6_v1,The March of the Human Footprint,"Human influence is driving planetary change, often in undesirable and unsustainable ways. Recent advances enabled us to measure changes in humanity’s footprint on Earth annually from 2000 – 2019 with a nine-fold improvement in spatial resolution over previous efforts. We found that earlier studies seriously under-estimated the magnitude, extent, and rate of change in the human footprint.  Inclusion of newly available data sources suggest that human influence on the land surface grew faster in the five years prior to the COVID-19 pandemic than at any other time in the last 12,000 years. The global extent of uninfluenced areas declined by 23% over the last two decades, an area equivalent to one-third the land mass of the United States. By providing a mechanism to regularly update maps going forward, this work provides a foundation for more accurate, detailed and timely approaches to sustainability.",2022-09-29T14:48:19.406102,2023-02-14T22:40:56.445246,2022-09-29T20:39:07.602349,2022-09-29T04:00:00,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/d7rh6,CC-By Attribution-ShareAlike 4.0 International,anthropogenic; global; human footprint; human modification; terrestrial,"[""anthropogenic"", ""global"", ""human footprint"", ""human modification"", ""terrestrial""]",Eric Wayne Sanderson; Kim Fisher; Nathaniel Robinson; Dustin Sampson; Adam Duncan; Lucinda Royte,"[{""id"": ""werqp"", ""name"": ""Eric Wayne Sanderson"", ""index"": 0, ""orcid"": ""0000-0002-7477-0193"", ""bibliographic"": true}, {""id"": ""zb4w7"", ""name"": ""Kim Fisher"", ""index"": 1, ""orcid"": null, ""bibliographic"": true}, {""id"": ""s9kvq"", ""name"": ""Nathaniel Robinson"", ""index"": 2, ""orcid"": null, ""bibliographic"": true}, {""id"": ""6uya9"", ""name"": ""Dustin Sampson"", ""index"": 3, ""orcid"": null, ""bibliographic"": true}, {""id"": ""fn3rt"", ""name"": ""Adam Duncan"", ""index"": 4, ""orcid"": null, ""bibliographic"": true}, {""id"": ""tej3m"", ""name"": ""Lucinda Royte"", ""index"": 5, ""orcid"": null, ""bibliographic"": true}]",Eric Wayne Sanderson,Spatial Science; Nature and Society Relations; Remote Sensing; Physical Sciences and Mathematics; Environmental Indicators and Impact Assessment; Human Geography; Environmental Monitoring; Life Sciences; Arts and Humanities; Other Ecology and Evolutionary Biology; Ecology and Evolutionary Biology; Environmental Sciences; Terrestrial and Aquatic Ecology; Social and Behavioral Sciences; Geography,"[{""id"": ""584240d954be81056ceca842"", ""text"": ""Spatial Science""}, {""id"": ""584240d954be81056ceca89a"", ""text"": ""Nature and Society Relations""}, {""id"": ""584240d954be81056ceca8bd"", ""text"": ""Remote Sensing""}, {""id"": ""584240d954be81056ceca9a1"", ""text"": ""Physical Sciences and Mathematics""}, {""id"": ""584240d954be81056ceca9b9"", ""text"": ""Environmental Indicators and Impact Assessment""}, {""id"": ""584240d954be81056ceca9e0"", ""text"": ""Human Geography""}, {""id"": ""584240d954be81056ceca9f1"", ""text"": ""Environmental Monitoring""}, {""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaab4"", ""text"": ""Arts and Humanities""}, {""id"": ""584240da54be81056cecaabd"", ""text"": ""Other Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecaaf7"", ""text"": ""Environmental Sciences""}, {""id"": ""584240da54be81056cecabe0"", ""text"": ""Terrestrial and Aquatic Ecology""}, {""id"": ""584240da54be81056cecac48"", ""text"": ""Social and Behavioral Sciences""}, {""id"": ""584240db54be81056cecacf6"", ""text"": ""Geography""}]",,0,,available,no,[],,2025-04-09T20:49:33.265327
6udn5_v1,Distribution and Variability of Cistanthe philhershkovitziana Hershk. (Cistanthe sect. Cistanthe; Montiaceae),"The present work exploits internet resources to update previously reported data for the distributional range and ecology of Cistanthe philhershkovitziana Hershk. (Cistanthe Spach sect. Cistanthe; Montiaceae), a conspicuous and not uncommon species of central and north-central Chile. The latitudinal range documented here is at least 4.8° greater than previously reported, extending from ca. 29°S (Huasco Province, Atacama Region) to ca. 33.8°S (San Antonio Province, Valparaiso Region). Possibly it extends further north to at least ca. 28.5°S. Morphological and ecological variability is discussed.",2022-09-29T12:32:03.574987,2024-05-28T20:34:42.611677,2022-09-29T20:38:07.438380,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/6udn5,CC-By Attribution-ShareAlike 4.0 International,Chile; Cistanthe philhershkovitziana; Montiaceae,"[""Chile"", ""Cistanthe philhershkovitziana"", ""Montiaceae""]",Mark Hershkovitz,"[{""id"": ""sp6du"", ""name"": ""Mark Hershkovitz"", ""index"": 0, ""orcid"": ""0000-0002-8828-7995"", ""bibliographic"": true}]",Mark Hershkovitz,Life Sciences; Biodiversity,"[{""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecac01"", ""text"": ""Biodiversity""}]",,0,,not_applicable,not_applicable,[],,2025-04-09T20:50:13.025318
wzdcp_v1,"Invasion dynamics of quagga mussels (Dreissena rostriformis bugensis) within a reservoir and its spatially intermittent watershed: Lake Piru and the Santa Clara River, California, USA","Since its discovery in Lake Mead in 2007, the invasive quagga mussel (Dreissena rostriformis bugensis) has rapidly spread throughout the lower Colorado River drainage. However, the invasion in California remained confined to the Colorado and water systems throughout southern California that receive water from the Colorado River until December 2013, when quagga mussels were first observed in Lake Piru, a reservoir in the Santa Clara River watershed of Ventura County, California. This paper describes population dynamics in Lake Piru and spread within the Santa Clara watershed over the first seven years since invasion. There was an initial boom period in the first year after colonization, with the highest densities and settlement rates between 2014 and 2017, a period of low and relatively stable lake water levels. Lake Piru’s temperature, oxygen, and water chemistry conditions were consistently within preferred bounds for quagga mussels. The mussel population initially expanded on hard substrates and eventually onto soft sediments as mussels attached to debris and each other.  The peak settlement rate (June 2015, 1.9 x 105 mussels m-2 month-1) in Lake Piru was within the range observed in Lake Mead (1 x 104 – 1 x 106 mussels m-2 month-1) during the initial invasion, but typically settlement was 10-100 times lower than rates observed in Lake Mead. Despite these lower settling rates, within 2 years of detection (late 2015), mussels were regularly found on soft sediments.  However, a fill event in 2017 dramatically increased the lake level and lead to substantial sediment deposition, which smothered the mussels on soft sediments and reduced the overall mussel population relative to the lake volume. Veligers (and settlement rates) were extremely low during the initial fill period, but rebounded within 6 months, despite relatively low levels of reproductive mussels observed in the lake. Large mussels were rare in 2018-2019, likely due to increased mortality during 2017, and the size distribution remained biased towards small size classes into 2021. Environmental conditions (particularly fill status and water temperature), rather than adult density, appear to be the primary driver of veliger abundance in this system, while recruitment was primarily explained by veliger abundance. While lake level fluctuations have potential to control the mussel population in the lake to some extent, lowering lake levels requires extended periods of elevated base flow as well as out-of-season water releases. These elevated water releases increase the flux of veligers into the creek and lead to downstream recruitment, particularly when veliger abundance is high. While seems relatively unlikely that quaggas will establish and reproduce in the Santa Clara River itself due to the unstable bed, highly fluctuating flows, and lack of lentic habitat needed for reproduction, periodic colonization within the river occurs, and is likely to lead to infestations in water systems that directly take in raw river water.",2022-09-29T01:05:11.521772,2023-02-14T22:43:05.768330,2022-09-29T20:38:24.415684,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/wzdcp,CC-By Attribution-ShareAlike 4.0 International,Dreissenid mussels; invasive species; population dynamics; veligers,"[""Dreissenid mussels"", ""invasive species"", ""population dynamics"", ""veligers""]",Michael Booth; Carolynn S. Culver,"[{""id"": ""z3r2p"", ""name"": ""Michael Booth"", ""index"": 0, ""orcid"": ""0000-0002-9842-085X"", ""bibliographic"": true}, {""id"": ""d6bcm"", ""name"": ""Carolynn S. Culver"", ""index"": 1, ""orcid"": null, ""bibliographic"": true}]",Michael Booth,Life Sciences; Other Ecology and Evolutionary Biology; Ecology and Evolutionary Biology; Biology; Terrestrial and Aquatic Ecology,"[{""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaabd"", ""text"": ""Other Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecab01"", ""text"": ""Biology""}, {""id"": ""584240da54be81056cecabe0"", ""text"": ""Terrestrial and Aquatic Ecology""}]",,1,Michael Booth is a former employee of United Water Conservation District and has provided paid consultant services to United related to quagga mussels. The analyses reported here were performed independently and were not financially supported.,no,no,[],,2025-04-09T20:50:03.399501
t58xw_v1,"Best practices in designing, sequencing and identifying random DNA barcodes","Random DNA barcodes are a versatile tool for tracking cell lineages, with applications ranging from development to cancer to evolution. Here we review and critically evaluate barcode designs as well as methods of barcode sequencing and initial processing of barcode data. We first demonstrate how various barcode design decisions affect data quality and propose a new optimal design that balances all considerations that we are currently aware of. We then discuss various options for the preparation of barcode sequencing libraries, including inline indices and Unique Molecular Identifiers (UMIs). Our main conclusion is that the utility of inline indices is high whereas that of UMIs is low. Finally, we test the performance of several established and new bioinformatic pipelines for the extraction of barcodes from raw sequencing reads and for error correction. We find that both alignment and regular expression-based approaches work well for barcode extraction, and that error correction pipelines designed specifically for barcode data are superior to generic ones. Overall, this review will help researchers approach their barcoding experiments in a deliberate and systematic way.",2022-09-28T16:48:37.223035,2023-02-14T22:43:37.520025,2022-09-28T20:21:12.381668,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/t58xw,CC-By Attribution-ShareAlike 4.0 International,barcodes; development; evolution; lineage tracking,"[""barcodes"", ""development"", ""evolution"", ""lineage tracking""]",Milo S. Johnson; Sandeep Venkataram; Sergey Kryazhimskiy,"[{""id"": ""a9ne5"", ""name"": ""Milo S. Johnson"", ""index"": 0, ""orcid"": null, ""bibliographic"": true}, {""id"": ""fysk3"", ""name"": ""Sandeep Venkataram"", ""index"": 1, ""orcid"": ""0000-0002-2012-2633"", ""bibliographic"": true}, {""id"": ""nw5sm"", ""name"": ""Sergey Kryazhimskiy"", ""index"": 2, ""orcid"": ""0000-0001-9128-8705"", ""bibliographic"": true}]",Milo S. Johnson,Cell and Developmental Biology; Bioinformatics; Evolution; Life Sciences; Ecology and Evolutionary Biology; Biotechnology,"[{""id"": ""584240d954be81056ceca84c"", ""text"": ""Cell and Developmental Biology""}, {""id"": ""584240d954be81056ceca8eb"", ""text"": ""Bioinformatics""}, {""id"": ""584240d954be81056ceca985"", ""text"": ""Evolution""}, {""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecabc2"", ""text"": ""Biotechnology""}]",,0,,available,not_applicable,[],,2025-04-09T20:50:04.874099
eq7xr_v1,Individual-based eco-evolutionary framework: towards unifying ecology and evolution,"Evolution is increasingly found to be rapid and entangled with ecological processes in complex eco-evolutionary dynamics, calling for a common conceptual framework. Yet, ecological and evolutionary theory remain largely separated, which constrains the development of integrative research. To overcome this separation, I suggest treating the entangled dynamics as a single eco-evolutionary process rather than as separate ecological and evolutionary processes connected by feedbacks. I propose a unified conceptual framework that integrates ecological and evolutionary processes at population and community levels by considering which of them result from the same individual-based process. The resulting framework is a means to understand the entangled dynamics through the interaction of five basic eco-evolutionary processes: natural selection, drift, dispersal, gene transfer, and mutation. The framework reveals relationships between existing theories and models, provides simple means to discuss complex dynamics, and outlines a holistic approach to major topics including diversity, stability, and stochasticity. The framework thus presents a step towards conceptually uniting ecology and evolutionary biology.",2022-09-28T12:13:05.484346,2023-02-14T22:43:58.826193,2022-09-28T20:20:55.202903,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/eq7xr,CC-By Attribution-NonCommercial-NoDerivatives 4.0 International,community; conceptual framework; eco-evolutionary dynamics; ecology; evolutionary biology; individual; organismal biology; population; rapid evolution,"[""community"", ""conceptual framework"", ""eco-evolutionary dynamics"", ""ecology"", ""evolutionary biology"", ""individual"", ""organismal biology"", ""population"", ""rapid evolution""]",Jan Hrcek,"[{""id"": ""89e4x"", ""name"": ""Jan Hrcek"", ""index"": 0, ""orcid"": ""0000-0003-0711-6447"", ""bibliographic"": true}]",Jan Hrcek,Life Sciences; Ecology and Evolutionary Biology; Biodiversity,"[{""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecac01"", ""text"": ""Biodiversity""}]",,0,,not_applicable,not_applicable,[],,2025-04-09T20:49:44.790695
npd6u_v1,"Using integrated multispecies occupancy models to map co-occurrence between bottlenose dolphins and fisheries in the Gulf of Lion, French Mediterranean Sea","In the Mediterranean Sea, interactions between marine species and human activities are prevalent. The coastal distribution of bottlenose dolphins (Tursiops truncatus) and the predation pressure they put on fishing stocks lead to regular interactions with fisheries. Multispecies occupancy models allow mapping co-occurrence between two (or more) species while accounting for false negatives and potential interspecific dependance. Here, we illustrated how to extend multispecies occupancy model to integrate multiple datasets to quantify spatial co-occurrence between trawlers and bottlenose dolphins in the Gulf of Lion, French Mediterranean Sea. We combined bottlenose dolphin and trawler detections and non-detections from both aerial surveys and boat surveys in the Gulf of Lion and map potential interactions. Possibility to integrate several datasources into multipsecies occupancy models opens promising avenues in the study of interactions between human activities and marine mammals that occur at large spatial scales",2022-09-27T15:28:39.492374,2023-02-14T22:45:01.839997,2022-09-27T20:24:36.648759,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/npd6u,CC-By Attribution-NonCommercial-NoDerivatives 4.0 International,NIMBLE; cetaceans; human-animal interaction; odontocetes; trawlers,"[""NIMBLE"", ""cetaceans"", ""human-animal interaction"", ""odontocetes"", ""trawlers""]",Valentin Lauret; Hélène Labach; Léa David; Matthieu Authier; Olivier Gimenez,"[{""id"": ""sqvw5"", ""name"": ""Valentin Lauret"", ""index"": 0, ""orcid"": ""0000-0002-7739-4277"", ""bibliographic"": true}, {""id"": ""gjkbn"", ""name"": ""H\u00e9l\u00e8ne Labach"", ""index"": 1, ""orcid"": null, ""bibliographic"": true}, {""id"": ""mxp52"", ""name"": ""L\u00e9a David"", ""index"": 2, ""orcid"": null, ""bibliographic"": true}, {""id"": ""apmux"", ""name"": ""Matthieu Authier"", ""index"": 3, ""orcid"": ""0000-0001-7394-1993"", ""bibliographic"": true}, {""id"": ""p3vtm"", ""name"": ""Olivier Gimenez"", ""index"": 4, ""orcid"": ""0000-0001-7001-5142"", ""bibliographic"": true}]",Valentin Lauret,Population Biology; Life Sciences; Ecology and Evolutionary Biology,"[{""id"": ""584240d954be81056ceca96b"", ""text"": ""Population Biology""}, {""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}]",,0,,available,no,[],,2025-04-09T20:50:17.216664
zjaet_v1,Evaluation of DNA Extracted from Timber Rattlesnake (Cotalus horridus) Cloacal and Blood Swabs for Microsatellite Genotyping,"Genetic research is a key component to modern wildlife conservation, but it is contingent on the collection of reliable and high-quality genetic samples. Invasive genetic sampling techniques have potential to negatively impact individuals, which may be prohibitive when working with threatened and endangered species. Prior to sample collection, project managers must try to balance the negative impact on individuals included in the study with the demand for DNA and the difficulty of obtaining samples. Although established methods for blood and tissue collection in reptiles meet the need for high-quantity and quality DNA, they inherently require longer handling times and more skill to obtain. Thus, non-invasive DNA collection methods, such as cloacal swabs, may be preferred when animal welfare is a priority. Cloacal swabs are quicker, easier, require less training and reduce handling time. To evaluate cloacal swabbing as an alternative to collecting blood, we obtained both cloacal and blood swabs. We extracted DNA from cloacal and blood cells that were collected from 23 Timber Rattlesnakes (Crotalus horridus). We assessed DNA by purity (A260/A280), concentration, and microsatellite genotyping. Our results show high-quality DNA can be obtained from both cloacal swabs and blood samples, but quality and concentration of DNA was significantly lower from cloacal swabs. Further, degradation and contamination affects the performance of cloacal DNA when compared to blood DNA in microsatellite-based genotyping. Although we recommend collecting blood samples whenever possible to obtain the highest-quality DNA, cloacal swabs represent a viable alternative for genetic sampling when using microsatellite loci as genetic markers.",2022-09-26T12:52:34.122112,2023-02-14T22:45:29.890081,2022-09-26T20:04:16.776494,2022-09-26T04:00:00,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/zjaet,CC-By Attribution-ShareAlike 4.0 International,conservation genetics; microsatellites; non-invasive sampling; reptile; snake,"[""conservation genetics"", ""microsatellites"", ""non-invasive sampling"", ""reptile"", ""snake""]",Aaron D. D'Amore; Kate C. Donlon; Andrew S. Hoffman; William Peterman,"[{""id"": ""vhq3s"", ""name"": ""Aaron D. D'Amore"", ""index"": 0, ""orcid"": null, ""bibliographic"": true}, {""id"": ""t9yn2"", ""name"": ""Kate C. Donlon"", ""index"": 1, ""orcid"": null, ""bibliographic"": true}, {""id"": ""mvp8r"", ""name"": ""Andrew S. Hoffman"", ""index"": 2, ""orcid"": null, ""bibliographic"": true}, {""id"": ""e24fm"", ""name"": ""William Peterman"", ""index"": 3, ""orcid"": ""0000-0001-5229-9268"", ""bibliographic"": true}]",Aaron D. D'Amore,Life Sciences; Other Ecology and Evolutionary Biology; Ecology and Evolutionary Biology; Terrestrial and Aquatic Ecology,"[{""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaabd"", ""text"": ""Other Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}, {""id"": ""584240da54be81056cecabe0"", ""text"": ""Terrestrial and Aquatic Ecology""}]",,0,,available,not_applicable,[],,2025-04-09T20:50:11.637899
n79kc_v1,Individual identity information persists in learned parrot calls after invasion,"Animals can actively encode different types of identity information in communication signals, such as group membership, individual identity, or social status. The social environments in which animals interact may favor different types of information, but whether identity information conveyed in learned signals is resilient or responsive to short-term changes in the social environment is not well understood. We inferred the type of identity information that was most salient in vocal signals by combining computational tools, including supervised machine learning, with a conceptual framework of “hierarchical mapping”, or patterns of relative acoustic convergence across social scales. We used populations of an invasive vocal learning species as a natural experiment to test whether social environments altered over ecological timescales changed the type of identity information that different populations emphasized in learned vocalizations. We compared the social scales with the most salient identity information among native and invasive range monk parakeet (Myiopsitta monachus) calls recorded in Uruguay and the United States, respectively. We also evaluated whether the identity information emphasized in invasive range calls changed over time. To place our findings in an evolutionary context, we benchmarked our results with another parrot species that exhibits well-established and distinctive regional vocal dialects that are consistent with signaling group identity. We found that native and invasive range monk parakeet calls both displayed the strongest convergence at the individual scale and minimal convergence within sites. We did not identify changes in the strength of acoustic convergence within sites over time in the invasive range calls. These results indicate that the individual identity information in learned vocalizations was resilient to social environments perturbed over ecological timescales. Our findings point to exciting directions for further research on the responsiveness of communication systems to changes in the social environment over different evolutionary timescales.",2022-09-23T18:14:47.151898,2023-02-14T22:47:11.011699,2022-09-23T20:08:12.450645,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/n79kc,CC-BY Attribution-No Derivatives 4.0 International,Acoustic communication; Biological invader; Contact call; Hierarchical mapping; Identity signaling; Individual signature; Monk parakeet; Myiopsitta monachus; Social information; Supervised machine learning; Vocal learning,"[""Acoustic communication"", ""Biological invader"", ""Contact call"", ""Hierarchical mapping"", ""Identity signaling"", ""Individual signature"", ""Monk parakeet"", ""Myiopsitta monachus"", ""Social information"", ""Supervised machine learning"", ""Vocal learning""]",Grace Smith-Vidaurre; Valeria Perez-Marrufo; Elizabeth A. Hobson; Alejandro Salinas-Melgoza; Timothy F. Wright,"[{""id"": ""xwk6b"", ""name"": ""Grace Smith-Vidaurre"", ""index"": 0, ""orcid"": ""0000-0002-0155-8159"", ""bibliographic"": true}, {""id"": ""mpwn9"", ""name"": ""Valeria Perez-Marrufo"", ""index"": 1, ""orcid"": null, ""bibliographic"": true}, {""id"": ""64d3f"", ""name"": ""Elizabeth A. Hobson"", ""index"": 2, ""orcid"": ""0000-0003-1523-6967"", ""bibliographic"": true}, {""id"": ""mfkq6"", ""name"": ""Alejandro Salinas-Melgoza"", ""index"": 3, ""orcid"": ""0000-0003-2024-3061"", ""bibliographic"": true}, {""id"": ""fj8ah"", ""name"": ""Timothy F. Wright"", ""index"": 4, ""orcid"": null, ""bibliographic"": true}]",Grace Smith-Vidaurre,Behavior and Ethology; Life Sciences; Ecology and Evolutionary Biology,"[{""id"": ""584240d954be81056ceca9d0"", ""text"": ""Behavior and Ethology""}, {""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}]",,0,,no,no,[],,2025-04-09T20:49:46.854367
ny9v8_v1,"Open access research infrastructures are critical for sustained citizen science growth: a case study of Australia’s national biodiversity platform, the Atlas of Living Australia (ALA)","Citizen science continues to make a substantial contribution to a wide variety of scientific disciplines by allowing the public to be involved in activities like idea generation, study design, data collection and analysis. Although the pace of citizen science has exploded in recent decades, there remains untapped potential for scientific output through investment in research infrastructure that more specifically supports citizen science activities. Here, we provide a case study of how the biodiversity data aggregator the Atlas of Living Australia (ALA) has supported the growth of citizen science over the past decade. We show that around one quarter of data collection projects provide around half of all species observation records in the ALA, supplementing specimen-based data to provide more comprehensive visualisation of species distributions. We then discuss how large data aggregators like the ALA support common challenges of the citizen science community by implementing tools to standardise complex data, safely store sensitive data, and improve participation and discoverability of citizen science data. Our findings demonstrate the importance of investment in research infrastructure to support and augment the scientific value of the citizen science movement globally.",2022-09-23T03:49:33.661587,2023-02-14T22:47:01.605785,2022-09-23T20:08:29.665874,,,ecoevorxiv,0,withdrawn,1,1,https://doi.org/10.32942/osf.io/ny9v8,CC-By Attribution-ShareAlike 4.0 International,citizen science; data; environmental monitoring; open science; research infrastructure,"[""citizen science"", ""data"", ""environmental monitoring"", ""open science"", ""research infrastructure""]",Erin Roger; Cameron Slayter; Dax Kellie; Peter Brenton; Elycia Wallis; Olivia Torresan; Andre Zerger,"[{""id"": ""47k6a"", ""name"": ""Erin Roger"", ""index"": 0, ""orcid"": null, ""bibliographic"": true}, {""id"": ""wv34u"", ""name"": ""Cameron Slayter"", ""index"": 1, ""orcid"": null, ""bibliographic"": true}, {""id"": ""fxwjr"", ""name"": ""Dax Kellie"", ""index"": 2, ""orcid"": ""0000-0001-7408-273X"", ""bibliographic"": true}, {""id"": ""5gak7"", ""name"": ""Peter Brenton"", ""index"": 3, ""orcid"": null, ""bibliographic"": true}, {""id"": ""rje8g"", ""name"": ""Elycia Wallis"", ""index"": 4, ""orcid"": null, ""bibliographic"": true}, {""id"": ""cdexg"", ""name"": ""Olivia Torresan"", ""index"": 5, ""orcid"": null, ""bibliographic"": true}, {""id"": ""d832h"", ""name"": ""Andre Zerger"", ""index"": 6, ""orcid"": null, ""bibliographic"": true}]",Erin Roger,Life Sciences; Ecology and Evolutionary Biology,"[{""id"": ""584240da54be81056cecaab0"", ""text"": ""Life Sciences""}, {""id"": ""584240da54be81056cecaaec"", ""text"": ""Ecology and Evolutionary Biology""}]",,1,All authors are employed by the Atlas of Living Australia but otherwise have no competing interests to declare.,available,no,[],,2025-04-09T20:49:32.752013